miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Homo sapiens



ABOUT THIS RECORD

ID: MNEST007975
species: Homo sapiens
miRNA family: miR-196b
source: miRNEST

Taxonomy by NCBI:
Homo sapiens Homo Homininae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CGACAGCACGACACTGCCTTC

miRNA*
AGGTAGTTTCCTGTTGTTGGG

mismatches: 4
bulges: 0

View larger
pre-miRNA
TTTAGGTAGTTTCCTGTTGTTGGGATCCACCTTTCTCTCGACAGCACGACACTGCCTTC

dot-bracket secondary structure
...(((((((.((.(((((((((((..........))))))))))).)).)))))))..


SIMILARITIES
miRBase mml-mir-196b: 8e-28

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-196: 3e-21
most similar mature miRNAs

Identical with: ptr-mir-196b from miRBase (MNEST030273)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;